Node 63
Ancestral DNA sequence:
Probabilities of bases and MPB (most probable base) at each site.
Site	A	C	G	T	MPB	Probability
1	1	0	0	0	A	1
2	0	0	0	1	T	1
3	0	0	1	0	G	1
4	1	0	0	0	A	1
5	0	0	0	1	T	1
6	0	0.14	0	0.86	T	0.86
7	0.99	0	0.01	0	A	0.99
8	0	0	0	1	T	1
9	0.01	0.07	0.01	0.91	T	0.91
10	0.04	0.15	0.02	0.79	T	0.79
11	0	0	0	1	T	1
12	0.2	0.61	0.02	0.17	C	0.61
13	0.21	0	0.79	0	G	0.79
14	1	0	0	0	A	1
15	0.11	0.13	0.03	0.73	T	0.73
16	0.99	0	0	0.01	A	0.99
17	0.02	0.96	0.01	0.02	C	0.96
18	0	0.98	0	0.02	C	0.98
19	0	0.01	0	0.99	T	0.99
20	0	0	0	1	T	1
21	0.98	0	0.02	0	A	0.98
22	0	0	1	0	G	1
23	0.77	0.19	0.03	0.02	A	0.77
24	0.15	0.49	0.13	0.24	C	0.49
25	0	0	1	0	G	1
26	1	0	0	0	A	1
27	0.25	0	0.75	0	G	0.75
28	0	0	0	1	T	1
29	0	0	0	1	T	1
30	0	0.08	0	0.92	T	0.92
31	0.01	0.99	0	0	C	0.99
32	1	0	0	0	A	1
33	0.02	0	0.98	0	G	0.98
34	0.08	0.77	0.04	0.11	C	0.77
35	0.17	0.06	0.62	0.14	G	0.62
36	0.01	0.49	0.02	0.48	C	0.49
37	0.51	0	0.48	0	A	0.51
38	0	0	0	1	T	1
39	0.01	0.1	0.01	0.89	T	0.89
40	0	0	0	1	T	1
41	1	0	0	0	A	1
42	0	0.08	0	0.92	T	0.92
43	0	1	0	0	C	1
44	0	0	1	0	G	1
45	0.14	0.25	0.19	0.42	T	0.42
46	0.09	0	0.91	0	G	0.91
47	0.43	0.39	0.09	0.09	A	0.43
48	0.37	0.11	0.42	0.09	G	0.42
49	0	0	1	0	G	1
50	0	0	1	0	G	1
51	0.18	0.14	0.58	0.1	G	0.58
52	0.99	0	0.01	0	A	0.99
53	0.98	0	0.02	0	A	0.98
54	0.83	0.02	0.13	0.02	A	0.83
55	1	0	0	0	A	1
56	1	0	0	0	A	1
57	0.99	0	0.01	0	A	0.99
58	0	0	0	1	T	1
59	0	0	1	0	G	1
60	0	0	1	0	G	1
61	0	1	0	0	C	1
62	1	0	0	0	A	1
63	0.05	0	0.94	0	G	0.94
64	0	1	0	0	C	1
65	0	0	1	0	G	1
66	0	0.97	0	0.03	C	0.97
67	0	0	0	1	T	1
68	0	0	1	0	G	1
69	0	0.07	0	0.93	T	0.93
70	0.97	0	0.03	0	A	0.97
71	0	0	0	1	T	1
72	0.15	0.04	0.79	0.03	G	0.79
73	0	0	1	0	G	1
74	1	0	0	0	A	1
75	0.01	0	0.99	0	G	0.99
76	0	0	1	0	G	1
77	0	1	0	0	C	1
78	0.04	0.48	0.04	0.45	C	0.48
79	1	0	0	0	A	1
80	0	0	0	1	T	1
81	0	0.8	0	0.2	C	0.8
82	0.97	0	0.03	0	A	0.97
83	1	0	0	0	A	1
84	0.02	0.47	0.02	0.49	T	0.49
85	1	0	0	0	A	1
86	1	0	0	0	A	1
87	0	0.8	0	0.19	C	0.8
88	0.65	0.27	0.07	0.02	A	0.65
89	0	0	0	1	T	1
90	0.01	0.2	0.01	0.79	T	0.79
91	0.24	0	0.75	0	G	0.75
92	0.99	0	0.01	0	A	0.99
93	0.48	0.12	0.22	0.17	A	0.48
94	0.85	0.12	0.01	0.03	A	0.85
95	0.78	0	0.22	0	A	0.78
96	0	0.26	0	0.73	T	0.73
97	1	0	0	0	A	1
98	0	0	0	1	T	1
99	0	0.69	0	0.31	C	0.69
100	0.67	0.01	0.31	0	A	0.67
101	0.98	0	0.02	0	A	0.98
102	0.09	0.02	0.86	0.03	G	0.86
103	0	1	0	0	C	1
104	0	1	0	0	C	1
105	0.21	0.17	0.34	0.29	G	0.34
106	0.98	0	0.02	0	A	0.98
107	1	0	0	0	A	1
108	0	0.1	0	0.9	T	0.9
109	0	0	1	0	G	1
110	0	0	0	1	T	1
111	0.06	0.14	0.09	0.72	T	0.72
112	0.01	0.01	0.01	0.98	T	0.98
113	0	0.03	0	0.97	T	0.97
114	0.01	0.1	0.01	0.88	T	0.88
115	0	0.02	0	0.98	T	0.98
116	1	0	0	0	A	1
117	0	0.02	0	0.98	T	0.98
118	0	0	0	1	T	1
119	0	1	0	0	C	1
120	0.14	0.03	0.8	0.03	G	0.8
121	0.98	0	0.02	0	A	0.98
122	0	0	0	1	T	1
123	0.09	0.23	0.05	0.63	T	0.63
124	0	0	1	0	G	1
125	0	0	1	0	G	1
126	0.01	0.68	0.02	0.29	C	0.68
127	0	0	1	0	G	1
128	1	0	0	0	A	1
129	0	0.02	0	0.98	T	0.98
130	0	0	0	1	T	1
131	0	1	0	0	C	1
132	0.45	0.02	0.5	0.02	G	0.5
133	0	1	0	0	C	1
134	0	0	0	1	T	1
135	0	0	1	0	G	1
136	0.02	0	0.98	0	G	0.98
137	0	0.01	0	0.99	T	0.99
138	0.06	0.18	0.05	0.71	T	0.71
139	0	0	0	1	T	1
140	1	0	0	0	A	1
141	0	0.03	0	0.97	T	0.97
142	0	1	0	0	C	1
143	0	0	1	0	G	1
144	0.01	0.87	0.08	0.05	C	0.87
145	0	0.97	0.01	0.02	C	0.97
146	0	0	0	1	T	1
147	0.07	0.16	0.28	0.49	T	0.49
148	0.02	0	0.98	0	G	0.98
149	0.05	0.9	0.03	0.02	C	0.9
150	0.19	0.2	0.47	0.15	G	0.47
151	0.1	0.01	0.87	0.02	G	0.87
152	0.45	0.44	0.03	0.07	A	0.45
153	0.14	0.26	0.07	0.53	T	0.53
154	0	0	1	0	G	1
155	0	0	1	0	G	1
156	0.01	0.42	0.01	0.55	T	0.55
157	0.23	0.31	0.17	0.29	C	0.31
158	0.01	0.93	0.01	0.05	C	0.93
159	0.2	0.25	0.09	0.46	T	0.46
160	0.03	0	0.97	0	G	0.97
161	0.06	0.3	0.53	0.1	G	0.53
162	0.31	0.37	0.15	0.17	C	0.37
163	0.11	0.56	0.2	0.13	C	0.56
164	0.95	0	0.04	0	A	0.95
165	0.16	0.17	0.58	0.09	G	0.58
166	0.07	0.83	0.04	0.06	C	0.83
167	0.74	0.19	0.05	0.01	A	0.74
168	0.18	0.14	0.58	0.1	G	0.58
169	0.08	0.15	0.76	0.01	G	0.76
170	0.89	0.01	0.09	0.01	A	0.89
171	0.14	0.3	0.16	0.4	T	0.4
172	0	0	1	0	G	1
173	0.42	0.05	0.52	0.01	G	0.52
174	0.32	0.18	0.39	0.11	G	0.39
175	0	0.08	0	0.92	T	0.92
176	0.03	0.02	0.15	0.8	T	0.8
177	0.33	0	0.66	0.01	G	0.66
178	0	0	0	1	T	1
179	0	0	0	1	T	1
180	0.04	0.17	0.12	0.68	T	0.68
181	0	0	1	0	G	1
182	0.99	0	0.01	0	A	0.99
183	0.46	0.03	0.49	0.02	G	0.49
184	0	0	1	0	G	1
185	0	0	1	0	G	1
186	0.14	0.45	0.21	0.21	C	0.45
187	1	0	0	0	A	1
188	1	0	0	0	A	1
189	0.01	0.57	0.01	0.42	C	0.57
190	0	1	0	0	C	1
191	0	0	1	0	G	1
192	0.01	0.77	0.01	0.21	C	0.77
193	0	1	0	0	C	1
194	0	0	1	0	G	1
195	0.01	0.27	0.01	0.72	T	0.72
196	0	0	0	1	T	1
197	1	0	0	0	A	1
198	0	0.14	0	0.86	T	0.86
199	0	0	0	1	T	1
200	0	0	0	1	T	1
201	0	0.38	0	0.62	T	0.62
202	0	0	1	0	G	1
203	1	0	0	0	A	1
204	0.02	0.13	0.02	0.84	T	0.84
205	0	0	1	0	G	1
206	0	0	0	1	T	1
207	0	0	1	0	G	1
208	0	1	0	0	C	1
209	1	0	0	0	A	1
210	0	0.21	0	0.78	T	0.78
211	0	0	0	1	T	1
212	1	0	0	0	A	1
213	0	0.04	0	0.95	T	0.95
214	0	0	0	1	T	1
215	1	0	0	0	A	1
216	0	0.96	0	0.04	C	0.96
217	0	1	0	0	C	1
218	0	0	0	1	T	1
219	0.09	0.19	0.08	0.64	T	0.64
220	0	0	1	0	G	1
221	0.18	0.79	0.02	0.01	C	0.79
222	0.03	0.88	0.07	0.02	C	0.88
223	0	0	1	0	G	1
224	0	0	1	0	G	1
225	0.62	0.02	0.34	0.02	A	0.62
226	0.01	0.91	0.02	0.06	C	0.91
227	1	0	0	0	A	1
228	0.25	0.04	0.69	0.03	G	0.69
229	0	0	1	0	G	1
230	1	0	0	0	A	1
231	0.87	0	0.13	0	A	0.87
232	1	0	0	0	A	1
233	0	0.98	0	0.02	C	0.98
234	0.17	0.14	0.61	0.08	G	0.61
235	0.35	0	0.65	0	G	0.65
236	0	0	0	1	T	1
237	0.02	0.44	0.03	0.51	T	0.51
238	0	0	1	0	G	1
239	1	0	0	0	A	1
240	0.16	0	0.84	0	G	0.84
241	0.1	0.01	0.79	0.1	G	0.79
242	0	0	0	1	T	1
243	0.01	0.14	0.02	0.83	T	0.83
244	0	0	1	0	G	1
245	0	1	0	0	C	1
246	0.12	0.27	0.26	0.36	T	0.36
247	0.11	0	0.88	0	G	0.88
248	0.91	0.02	0.06	0.01	A	0.91
249	0.01	0.27	0.01	0.71	T	0.71
250	1	0	0	0	A	1
251	1	0	0	0	A	1
252	1	0	0	0	A	1
253	0.73	0.04	0.2	0.03	A	0.73
254	0.23	0.05	0.68	0.03	G	0.68
255	0.02	0.76	0.03	0.19	C	0.76
256	0.12	0.01	0.87	0.01	G	0.87
257	0.06	0.57	0.04	0.33	C	0.57
258	0.23	0.07	0.65	0.05	G	0.65
259	0	0.8	0	0.2	C	0.8
260	0	0	0	1	T	1
261	0.27	0.01	0.71	0.01	G	0.71
262	0.99	0	0.01	0	A	0.99
263	0.03	0.74	0.02	0.21	C	0.74
264	0.11	0.22	0.19	0.48	T	0.48
265	0.03	0.63	0.03	0.31	C	0.63
266	0	0.97	0	0.02	C	0.97
267	0.4	0.04	0.52	0.05	G	0.52
268	0	0	1	0	G	1
269	0.17	0.01	0	0.82	T	0.82
270	0.29	0.01	0.69	0.01	G	0.69
271	0.32	0.01	0.67	0	G	0.67
272	0.03	0.04	0.01	0.93	T	0.93
273	0.18	0.07	0.63	0.13	G	0.63
274	0.01	0.01	0.98	0	G	0.98
275	0	0.99	0	0.01	C	0.99
276	0.01	0.58	0.01	0.4	C	0.58
277	0	0	0	1	T	1
278	1	0	0	0	A	1
279	0	0.02	0	0.97	T	0.97
280	0	1	0	0	C	1
281	0.17	0	0.83	0	G	0.83
282	0.08	0.55	0.23	0.13	C	0.55
283	0	0	1	0	G	1
284	1	0	0	0	A	1
285	0	0.02	0	0.98	T	0.98
286	0	0	1	0	G	1
287	1	0	0	0	A	1
288	1	0	0	0	A	1
289	1	0	0	0	A	1
290	0	0.99	0.01	0	C	0.99
291	0.01	0.51	0.01	0.48	C	0.51
292	0	0	1	0	G	1
293	1	0	0	0	A	1
294	0	0.77	0	0.23	C	0.77
295	0	1	0	0	C	1
296	0	0	1	0	G	1
297	0.09	0.39	0.11	0.41	T	0.41
298	0	0	1	0	G	1
299	1	0	0	0	A	1
300	0.03	0	0.97	0	G	0.97
301	0	0	0	1	T	1
302	0	0.01	0	0.99	T	0.99
303	0	0.09	0	0.9	T	0.9
304	0	0.03	0	0.97	T	0.97
305	0	0	0	1	T	1
306	0.01	0.85	0.02	0.12	C	0.85
307	0.97	0.01	0.02	0	A	0.97
308	0.01	0	0.98	0	G	0.98
309	0.02	0.45	0.02	0.51	T	0.51
310	0	0	1	0	G	1
311	0	0	1	0	G	1
312	0.15	0.19	0.53	0.13	G	0.53
313	0.03	0.79	0.04	0.14	C	0.79
314	0.98	0	0.02	0	A	0.98
315	0.3	0.02	0.66	0.02	G	0.66
316	0	0	0	0	-	0
317	0	0	0	0	-	0
318	0	0	0	0	-	0
319	0	0	1	0	G	1
320	0	0	1	0	G	1
321	0.01	0.53	0.01	0.45	C	0.53
322	0	0	1	0	G	1
323	1	0	0	0	A	1
324	0.39	0	0.6	0	G	0.6
325	0.96	0	0.04	0	A	0.96
326	0.06	0.85	0.05	0.04	C	0.85
327	0.46	0.09	0.33	0.11	A	0.46
328	0	0.99	0	0.01	C	0.99
329	0.94	0	0.05	0.01	A	0.94
330	0.03	0.16	0.04	0.77	T	0.77
331	0.03	0.81	0.04	0.12	C	0.81
332	0.79	0.01	0.2	0	A	0.79
333	0.24	0.32	0.33	0.1	G	0.33
334	0.04	0.36	0.54	0.06	G	0.54
335	0	0	0	1	T	1
336	0.22	0.45	0.14	0.19	C	0.45
337	0.47	0.02	0.5	0.02	G	0.5
338	0.65	0.01	0.33	0.01	A	0.65
339	0.24	0.08	0.63	0.06	G	0.63
340	0.07	0.07	0.86	0.01	G	0.86
341	0.82	0.16	0.01	0.01	A	0.82
342	0.72	0.01	0.25	0.01	A	0.72
343	0	0	1	0	G	1
344	0	0	1	0	G	1
345	0.02	0.79	0.02	0.17	C	0.79
346	1	0	0	0	A	1
347	1	0	0	0	A	1
348	0.01	0.9	0.01	0.08	C	0.9
349	0.01	0	0.99	0	G	0.99
350	0	0	0	1	T	1
351	0.04	0.7	0.12	0.14	C	0.7
352	0	0	1	0	G	1
353	0	0.01	0	0.99	T	0.99
354	0.08	0.33	0.11	0.48	T	0.48
355	1	0	0	0	A	1
356	0	0	0	1	T	1
357	0	0.5	0	0.49	C	0.5
358	0	0	0	1	T	1
359	0	0	0	1	T	1
360	0	0.2	0	0.8	T	0.8
361	0	0	1	0	G	1
362	1	0	0	0	A	1
363	0.55	0.09	0.17	0.19	A	0.55
364	1	0	0	0	A	1
365	1	0	0	0	A	1
366	0	1	0	0	C	1
367	0.02	0.87	0.02	0.1	C	0.87
368	1	0	0	0	A	1
369	0	0.62	0	0.37	C	0.62
370	0	0.97	0.02	0.01	C	0.97
371	1	0	0	0	A	1
372	0.05	0	0.95	0	G	0.95
373	0	0	1	0	G	1
374	0	1	0	0	C	1
375	0.34	0.15	0.19	0.32	A	0.34
376	0	0.94	0	0.06	C	0.94
377	1	0	0	0	A	1
378	0	1	0	0	C	1
379	0	1	0	0	C	1
380	0	0	1	0	G	1
381	0.43	0.18	0.28	0.11	A	0.43
382	0	0	0	1	T	1
383	0	0	0	1	T	1
384	0	0.15	0	0.85	T	0.85
385	0.7	0.04	0.17	0.1	A	0.7
386	0.16	0.61	0.08	0.15	C	0.61
387	0.43	0.09	0.44	0.04	G	0.44
388	0.03	0.2	0.7	0.07	G	0.7
389	0.97	0	0.03	0	A	0.97
390	0.57	0.08	0.26	0.09	A	0.57
391	0.22	0	0.78	0	G	0.78
392	0.04	0.01	0.96	0	G	0.96
393	0.07	0.24	0.12	0.57	T	0.57
394	0.65	0.02	0.31	0.01	A	0.65
395	0.99	0	0.01	0	A	0.99
396	0.05	0.92	0.01	0.03	C	0.92
397	0.12	0.39	0.47	0.02	G	0.47
398	0.77	0.01	0.22	0	A	0.77
399	0.17	0.3	0.4	0.13	G	0.4
400	0	0	1	0	G	1
401	0	0	0	1	T	1
402	0.54	0.05	0.38	0.03	A	0.54
403	0	0	0	0	-	0
404	0	0	0	0	-	0
405	0	0	0	0	-	0
406	0	0	0	0	-	0
407	0	0	0	0	-	0
408	0	0	0	0	-	0
409	0.99	0	0.01	0	A	0.99
410	0.48	0	0.52	0	G	0.52
411	0.59	0.01	0.39	0.01	A	0.59
412	1	0	0	0	A	1
413	1	0	0	0	A	1
414	0.92	0	0.08	0	A	0.92
415	0	0	1	0	G	1
416	0	0	0	1	T	1
417	0.03	0.67	0.14	0.15	C	0.67
418	0.97	0	0.03	0	A	0.97
419	0	0	0	1	T	1
420	0.02	0.26	0.05	0.68	T	0.68
421	0	0.77	0	0.23	C	0.77
422	0	0	0	1	T	1
423	0.71	0.08	0.12	0.09	A	0.71
424	1	0	0	0	A	1
425	1	0	0	0	A	1
426	0.97	0	0.03	0	A	0.97
427	0	0	1	0	G	1
428	0	0	0	1	T	1
429	0.17	0.14	0.59	0.1	G	0.59
430	1	0	0	0	A	1
431	0	1	0	0	C	1
432	0.01	0.73	0.01	0.25	C	0.73
433	0.5	0	0.5	0	G	0.5
434	0	0	0	1	T	1
435	0.12	0.19	0.07	0.62	T	0.62
436	0	0	1	0	G	1
437	1	0	0	0	A	1
438	0.89	0	0.11	0	A	0.89
439	0	0	1	0	G	1
440	1	0	0	0	A	1
441	0.1	0.7	0.04	0.16	C	0.7
442	0.97	0	0.03	0	A	0.97
443	0	0.02	0.98	0	G	0.98
444	0.02	0.72	0.13	0.14	C	0.72
445	0	0	0	1	T	1
446	1	0	0	0	A	1
447	0	0.01	0	0.99	T	0.99
448	0	0	0	1	T	1
449	0	0	0	1	T	1
450	0	0.99	0	0	C	0.99
451	0.01	0.89	0.05	0.06	C	0.89
452	0	0	0	1	T	1
453	0.11	0.16	0.07	0.66	T	0.66
454	1	0	0	0	A	1
455	1	0	0	0	A	1
456	0	0.71	0	0.29	C	0.71
457	1	0	0	0	A	1
458	1	0	0	0	A	1
459	1	0	0	0	A	1
460	0	0	0	1	T	1
461	1	0	0	0	A	1
462	0.93	0	0.07	0	A	0.93


The most probable ancestral DNA sequence is:
ATGATTATTTTCGATACCTTAGACGAGTTTCAGCGCATTTATCGTGAGGGGAAAAAATGGCAGCGCTGTATGGAGGCCATCAATAACATTGAAAATATCAAGCCGAATGTTTTTTATTCGATTGGCGATTCGCTGGTTTATCGCCTTGCGGATGGTCCTGGCCAGCAGGATGGGTTGTTTGAGGGCAACCGCCGTTATTTTGATGTGCATTATTACCTTGCCGGACAGGAAACGGTTGAGGTTGCTGATAAAAGCGCGCTGACTCCGGTGGTGGCCTATCGCGATGAAACCGACCGTGAGTTTTTCAGTGGGCAG---GGCGAGACACATCAGGTCGAGGAAGGCAACGTCGTTATCTTTGAAAACCACCAGGCACACCGATTTACGGAAGGTAACGAGGTA------AGAAAAGTCATTCTAAAAGTGACCGTTGAAGACAGCTATTTCCTTAACAAATAA

The most probable DNA sequence without gaps is:
ATGATTATTTTCGATACCTTAGACGAGTTTCAGCGCATTTATCGTGAGGGGAAAAAATGGCAGCGCTGTATGGAGGCCATCAATAACATTGAAAATATCAAGCCGAATGTTTTTTATTCGATTGGCGATTCGCTGGTTTATCGCCTTGCGGATGGTCCTGGCCAGCAGGATGGGTTGTTTGAGGGCAACCGCCGTTATTTTGATGTGCATTATTACCTTGCCGGACAGGAAACGGTTGAGGTTGCTGATAAAAGCGCGCTGACTCCGGTGGTGGCCTATCGCGATGAAACCGACCGTGAGTTTTTCAGTGGGCAGGGCGAGACACATCAGGTCGAGGAAGGCAACGTCGTTATCTTTGAAAACCACCAGGCACACCGATTTACGGAAGGTAACGAGGTAAGAAAAGTCATTCTAAAAGTGACCGTTGAAGACAGCTATTTCCTTAACAAATAA

The accuracy score for that sequence is 0.86309050772627

The accuracy score is defined as the average probability of
the most probable bases.  It is NOT the probability that the
most probable sequence is correct.  That probability is 1.19527429960972e-35.
The natural log of that probability is -80.4121025563259.

Ancestral Protein Sequence:
Column headings:
MPAA = most probable amino acid, pMPAA = probability of MPAA
MPAA2 = second most probable amino acid, pMPAA2 = probability of MPAA2
Ratio = pMPAA/pMPAA2,  Unreliable means Ratio <1.5

MPAA	pMPAA	MPAA2	pMPAA2	Ratio
M	1	A	0	9999	
I	1	A	0	9999	
I	0.9801	V	0.01	98.01	
F	0.6162	L	0.3238	1.90302655960469	
D	0.6794	N	0.1806	3.76190476190476	
T	0.9504	N	0.0198	48	
L	1	A	0	9999	
D	0.5621	E	0.2156	2.60714285714286	
E	1	A	0	9999	
F	1	A	0	9999	
Q	0.99	K	0.01	99	
R	0.478888	H	0.126973	3.77157348412655	
I	0.51	V	0.4848	1.0519801980198	Unreliable
Y	1	A	0	9999	
R	1	A	0	9999	
A	0.351351	E	0.309127	1.13659110980277	Unreliable
G	1	A	0	9999	
K	0.931392	N	0.038808	24	
K	1	A	0	9999	
W	1	A	0	9999	
Q	0.99	A	0	9999	
R	1	A	0	9999	
C	1	A	0	9999	
M	0.7663	I	0.2134	3.59090909090909	
E	1	A	0	9999	
A	1.01	R	0	9999	
I	1	A	0	9999	
N	0.9312	K	0.0388	24	
N	0.99	A	0	9999	
I	0.65	L	0.2731	2.38008055657268	
E	0.51975	D	0.215325	2.41379310344828	
N	0.65637	S	0.18513	3.54545454545455	
I	1	A	0	9999	
K	0.62377	E	0.28861	2.16129032258065	
P	1.01	A	0	9999	
N	0.98	D	0.02	49	
V	1.01	A	0	9999	
F	0.931588	S	0.0294	31.6866666666667	
Y	0.98	H	0.02	49	
S	1	A	0	9999	
I	0.931	M	0.049	19	
G	1	A	0	9999	
D	1	A	0	9999	
S	0.99	A	0	9999	
L	1	A	0	9999	
V	0.9702	I	0.01881	51.578947368421	
Y	1	A	0	9999	
R	1.01	A	0	9999	
L	0.977	F	0.013	75.1538461538462	
A	0.89082	E	0.03234	27.5454545454545	
A	0.3828	D	0.309285	1.23769338959212	Unreliable
G	0.99	A	0	9999	
P	0.2883	S	0.271333	1.0625320178526	Unreliable
G	0.5141	A	0.291	1.76666666666667	
Q	0.39368	E	0.1406	2.8	
Q	0.466792	P	0.1577	2.96	
D	0.47348	E	0.20292	2.33333333333333	
G	0.52	E	0.2982	1.74379610999329	
L	0.79264	W	0.09108	8.70267896354853	
F	0.85	L	0.16	5.3125	
E	0.9405	D	0.0495	19	
G	1.01	A	0	9999	
N	0.99	K	0.02	49.5	
R	1	A	0	9999	
R	1.01	A	0	9999	
Y	1	A	0	9999	
F	1	A	0	9999	
D	0.97	E	0.04	24.25	
V	1	A	0	9999	
H	0.99	A	0	9999	
Y	0.99	A	0	9999	
Y	1	A	0	9999	
L	1	A	0	9999	
A	0.79	D	0.162	4.87654320987654	
G	1	A	0	9999	
Q	0.8554	H	0.0637	13.4285714285714	
E	1	A	0	9999	
T	0.98	M	0.0122	80.327868852459	
V	0.65	I	0.3395	1.91458026509573	
E	1	A	0	9999	
V	0.79	I	0.098	8.06122448979592	
A	1.01	R	0	9999	
D	0.784784	N	0.098098	8	
K	1	A	0	9999	
S	0.47308	N	0.159505	2.96592583304599	
A	0.4959	V	0.2871	1.72727272727273	
L	0.996	F	0.004	249	
T	0.7326	I	0.168399	4.35038212815991	
P	0.617211	S	0.303707	2.03225806451613	
V	0.82	E	0.1666	4.921968787515	
V	0.629331	M	0.187488	3.35664682539683	
A	0.9702	P	0.0099	98	
Y	0.99	A	0	9999	
R	0.8217	H	0.1156	7.10813148788927	
D	1	A	0	9999	
E	1	A	0	9999	
T	0.9999	S	0.0099	101	
D	1	A	0	9999	
R	1	A	0	9999	
E	1	A	0	9999	
F	0.9801	S	0.0099	99	
F	0.9409	L	0.0591	15.9204737732657	
S	0.912576	R	0.047824	19.0819672131148	
G	1	A	0	9999	
Q	0.743232	X	0.132552	5.60709759188846	
	0	-	0	0
G	1	A	0	9999	
E	0.99	A	0	9999	
T	0.80784	K	0.045504	17.753164556962	
H	0.865458	Q	0.065142	13.2857142857143	
Q	0.364743	H	0.268758	1.35714285714286	Unreliable
V	0.54	L	0.3816	1.41509433962264	Unreliable
E	0.28275	K	0.265785	1.06382978723404	Unreliable
E	0.684044	A	0.136224	5.02146464646465	
G	1	A	0	9999	
N	0.98	K	0.02	49	
V	0.99	I	0.0088	112.5	
V	0.99	A	0.01	99	
I	0.99	A	0	9999	
F	1	A	0	9999	
E	0.72	D	0.28	2.57142857142857	
N	1	A	0	9999	
H	0.8613	Y	0.099	8.7	
Q	0.97	E	0.02	48.5	
A	1	R	0	9999	
H	0.94	Y	0.06	15.6666666666667	
R	1	A	0	9999	
F	1	A	0	9999	
T	0.427	A	0.1037	4.11764705882353	
E	0.56357	Q	0.16102	3.5	
G	0.7488	S	0.171072	4.37710437710438	
N	0.611325	D	0.291555	2.09677419354839	
E	0.206283	Q	0.171171	1.20512820512821	Unreliable
V	1	A	0	9999	
	0	-	0	0
	0	-	0	0
R	0.504504	K	0.465696	1.08333333333333	Unreliable
K	1	A	0	9999	
V	0.99	A	0	9999	
I	0.9312	M	0.0485	19.2	
L	0.9609	F	0.0391	24.5754475703325	
K	1	A	0	9999	
V	1	A	0	9999	
T	1	A	0	9999	
V	0.5	I	0.465	1.0752688172043	Unreliable
E	1	A	0	9999	
D	0.86	E	0.14	6.14285714285714	
S	0.817516	R	0.14259	5.73333333333333	
Y	1	A	0	9999	
F	0.99	A	0	9999	
L	0.9008	V	0.05	18.016	
N	1	A	0	9999	
K	1	A	0	9999	
X	1	A	0	9999	


The most probable ancestral protein sequence is:
MIIFDTLDEFQRIYRAGKKWQRCMEAINNIENIKPNVFYSIGDSLVYRLAAGPGQQDGLFEGNRRYFDVHYYLAGQETVEVADKSALTPVVAYRDETDREFFSGQ-GETHQVEEGNVVIFENHQAHRFTEGNEV--RKVILKVTVEDSYFLNKX

The most probable ancestral protein sequence without gaps is:
MIIFDTLDEFQRIYRAGKKWQRCMEAINNIENIKPNVFYSIGDSLVYRLAAGPGQQDGLFEGNRRYFDVHYYLAGQETVEVADKSALTPVVAYRDETDREFFSGQGETHQVEEGNVVIFENHQAHRFTEGNEVRKVILKVTVEDSYFLNKX

The accuracy score for that sequence is 0.863649456953642

The accuracy score is defined as the average probability of
the most probable amino acids.  It is NOT the probability that the
most probable sequence is correct.  That probability is 6.1544481033779e-13
The natural log of that probability is -28.1164311196951.

